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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949924.1_cds_XP_016490615.1_81026
CDS Infomation

[gene=LOC107810362] [db_xref=GeneID:107810362] [protein=polygalacturonase At1g48100-like] [protein_id=XP_016490615.1] [location=complement(join(21329..21706,22511..22701,23434..23641,23957..24001,24782..24979,25321..25452,26239..26391))] [gbkey=CDS]
Sequence

ATGTTGAGGTTTAGCGTAAATCTCTTGAAGTTAGTCATTTTGCTGTTTTTACTAATCTGT
TGTTTGGAGAGTGCAATATGCAATGAGAATTCTTCTGTCTTTAATGTATTAGACTATGGT
GCTAAAGGTGACGGTACCACAGATGACACCAAAACAATTGAAGCGGCATGGATAGAAGCT
TGCAAAGTTGAAGGATCAACTATAGTGGTTCCATCAGATTATGATTTCCTAGTTGGACCC
ATCTCTTTTTCAGGACCACATTGCGAAGAAAACATTGTTTTCCTGTTGGATGGGAGAATT
ATAGCACCAACAAACCCTAAAATTTGGGGTTCAGGGCTATTACAATGGCTTGAATTCAAA
AAGCTAAATGGAATATCTATCAAAGGAAAAGGAACTATTGATGGTCAAGGCTCAGTTTGG
TGGCAAAACACTCATTTAGAAGATCCTGATGATGATCCAAATTATACTACGCTATTTGCT
TTGACAAGTAGCACAGCAAAAGGAAAAATGCCCAGAACCAGACCAACAGCTCTGAGGTTT
TATGGGTGTTCTAATGTGGTAGTAACAGGCATAACAATCCAAAACAGCCCTAAAGCACAT
CTAAAGTTTGATAGTTGTGTGACTATTCAAGTTTCTGGTATCACAATTTCATCACCAGAA
GATAGCCCCAATACAGATGGAATTCACCTTCAGAACTCCCAAAATGTTGTTATCCATAGC
AGTGATCTTGATTGTGGAGATGATTGCATCTCTATTCAAACTGGAACTTCAGCTGTGTTC
ATTCATGATGTGAAGTGTGGACCTGGACATGGATTTAGCATAGGAGGGCTGGGAAATGAC
AACACCAAAGCCTGTGTCTCCAACATAACAGTTCGTGATTCCACACTACACAATACTTTG
ACTGGTGTACGAATCAAAACATGGCAGGGAGGCTCAGGTTCAGTTCAAGGGATCATGTTT
TCGAATATCCAAGTTTCAGATGTGGAAACACCAATAATAATTGATCAATTCTATTGTGAT
AAAAGCAAATGCAAGAATCAGACATCAGCAGTGGCCATCGCAGGGGTTTCATATCAATCA
ATAAAAGGAACATATTCATATGAACCACTTCATTTTGCATGCAGTGATTCTGTGCCATGC
ACTGGTGTTTCCCTTGCAGACATACAGCTTAAACCTTCACCAAAAAGGGAACATTTTTAT
GGACCTTATTGTTGGCAAACTTATGGAGAATTGAAAACAAAGACAACCCCTCCAATTGAT
TGTATACAACCTGATCAAGACACCCCTGATTATGATTCTTGTTGA

Peptide Sequence

PEP ID

XP_016490615.1
PEP Infomation

PREDICTED: polygalacturonase At1g48100-like [Nicotiana tabacum]
Sequence

MLRFSVNLLKLVILLFLLICCLESAICNENSSVFNVLDYGAKGDGTTDDTKTIEAAWIEA
CKVEGSTIVVPSDYDFLVGPISFSGPHCEENIVFLLDGRIIAPTNPKIWGSGLLQWLEFK
KLNGISIKGKGTIDGQGSVWWQNTHLEDPDDDPNYTTLFALTSSTAKGKMPRTRPTALRF
YGCSNVVVTGITIQNSPKAHLKFDSCVTIQVSGITISSPEDSPNTDGIHLQNSQNVVIHS
SDLDCGDDCISIQTGTSAVFIHDVKCGPGHGFSIGGLGNDNTKACVSNITVRDSTLHNTL
TGVRIKTWQGGSGSVQGIMFSNIQVSDVETPIIIDQFYCDKSKCKNQTSAVAIAGVSYQS
IKGTYSYEPLHFACSDSVPCTGVSLADIQLKPSPKREHFYGPYCWQTYGELKTKTTPPID
CIQPDQDTPDYDSC

Transcript Sequence

Gene sequence data has not been registered.